public class Visualization extends Object
Constructor and Description |
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Visualization() |
Modifier and Type | Method and Description |
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static void |
createHTMLs(AlignmentPath[][] alignments,
ArrayList<String> usedKeys,
String datasetName,
String savePath,
String[] programNames,
ExternalContent[] extContent,
boolean upperTriangle)
Visualizes given alignments in clear and adaptable tables.
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public static void createHTMLs(AlignmentPath[][] alignments, ArrayList<String> usedKeys, String datasetName, String savePath, String[] programNames, ExternalContent[] extContent, boolean upperTriangle)
alignments
- Matrix of alignments.usedKeys
- Keys which should be displayed in the html-output. Put a null
if you want to use all keys specified in alignment and sequence.
The sequence of keys determines the sequance in the subsequent table.datasetName
- The html-output will be combined in a directory under
this name.savePath
- Path were the datasetName-directory will be created.programNames
- Names for the aligned programs.extContent
- Optional; for a description what an external content is
and how it works, see there.upperTriangle
- Determines the appearance of the alignment matrix
and thus the clickable alignments.Copyright (C) 2013, 2014 Benjamin Paaßen, Charlie Krüger, Georg Zentgraf, AG Theoretical Computer Science, Centre of Excellence Cognitive Interaction Technology (CITEC), University of Bielefeld, licensed under the AGPL v. 3: http://openresearch.cit-ec.de/projects/tcs